Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874896.1_cds_XP_016435651.1_31589
CDS Infomation

[gene=LOC107761874] [db_xref=GeneID:107761874] [protein=geranylgeranyl pyrophosphate synthase, chloroplastic-like] [protein_id=XP_016435651.1] [location=6625..7725] [gbkey=CDS]
Sequence

ATGAGATCTATGAATCTTGTCGATTCATGGGCTGCTCAAGTTTGTTCAGTTTTCAATCAA
ACCTTACCCAGTAAAACCTTCACTGGATTCATGAAAATTCCTGTGAAAAACCCAAGTTTT
TTGAAACAAAAAAGACCATTTTCTGCTCTAAGTGTGTCAGCTATTGCTACCAAAGAAGAT
GAGAAAGTTAAGGAAACTGAAACTCAGAAGGAGCAATTCAATTTCAAAACTTACGTAGCT
GAAAAGGCTATTTCTGTAAATAAAGCTTTAGATGAGGCTGTTATAGTAAAAGACCCACCT
GTGATCCACGAAGCAATGCGCTATTCACTTCTCGCCGGCGGTAAGAGAGTCCGGCCGATG
CTCTGCCTCGCCGCCTGCGAGCTAGTCGGCGGCGACCAATCCAACGCTATGCCGGCTGCT
TGCGCCGTCGAGATGATCCACACTATGTCCCTCATTCACGACGATTTACCTTGTATGGAT
AACGACGATCTCCGCCGTGGAAAGCCGACGAACCACAAAGTCTACGGCGAGGACGTGGCG
GTCCTCGCCGGAGACTCGCTCCTCGCTTTCGCCTTCGAGTACATCGCCACCGCTACCGCC
GGAGTTTCACCGTCGAGGATCCTCGCCGCCATCGGCGAACTGGCGAAATCCATCGGAACT
GAAGGGTTAGTAGCTGGACAAGTAGCGGATATAGCTTGTACTGGTAACCCTAATGTTGGA
CTCGACACACTCGAATTCATTCACATACACAAAACGGCGGCGCTTCTAGAAGCTTCCGTA
GTTCTCGGAGCAATCCTCGGCGGCGGAACAGGTGAAGAAGTAGAGAAATTGAGAAGATTC
GCGAGGTGTATCGGATTATTGTTTCAAGTAGTGGATGATATACTCGATGTTACAAAGTCG
TCGGAGGAGCTCGGAAAAACCGCCGGAAAAGATTTGGTAGTGGATAAAACGACGTATCCA
AAACTGCTGGGATTGGAAAAGGCTAAGGAATTTGCGGCGGAGCTCAACCGAGATGCTAAA
CAACAGCTGGCGGATTTTGATCCACACAAAGCTGCTCCGCTGATTGCCTTGGCAGATTAC
ATTGCTTATCGTGAAAATTAG

Peptide Sequence

PEP ID

XP_016435651.1
PEP Infomation

PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Nicotiana tabacum]
Sequence

MRSMNLVDSWAAQVCSVFNQTLPSKTFTGFMKIPVKNPSFLKQKRPFSALSVSAIATKED
EKVKETETQKEQFNFKTYVAEKAISVNKALDEAVIVKDPPVIHEAMRYSLLAGGKRVRPM
LCLAACELVGGDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVA
VLAGDSLLAFAFEYIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVG
LDTLEFIHIHKTAALLEASVVLGAILGGGTGEEVEKLRRFARCIGLLFQVVDDILDVTKS
SEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNRDAKQQLADFDPHKAAPLIALADY
IAYREN

Transcript Sequence

Gene sequence data has not been registered.